Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007223.1 Corchorus capsularis cultivar CVL-1 contig07244, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59282

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1050--1092
2
21.5
2
100
0
86
48
0
51
0
1.00
10085--10266
78
2.3
78
98
0
346
31
29
9
29
1.89
20075--20114
18
2.2
19
90
4
64
5
10
0
85
0.75
20075--20114
19
2.2
18
86
13
55
5
10
0
85
0.75
25344--25374
16
1.9
16
93
0
53
35
6
0
58
1.24
25610--25683
37
2.0
37
94
0
130
32
10
16
40
1.83
25851--25922
29
2.4
29
81
6
83
20
20
19
38
1.93
34156--34193
18
2.1
18
95
0
67
21
5
13
60
1.52
41622--41654
2
16.5
2
100
0
66
48
0
0
51
1.00
45135--45165
12
2.7
11
90
9
53
0
9
3
87
0.66
58729--58761
3
11.0
3
100
0
66
66
0
0
33
0.92
59143--59172
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!