Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007225.1 Corchorus capsularis cultivar CVL-1 contig07246, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18895

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68--102
3
12.0
3
87
6
54
65
2
0
31
1.07
3844--3909
30
2.2
30
83
2
78
37
18
16
27
1.92
4659--4700
22
2.0
22
85
4
59
50
0
42
7
1.30
7378--7465
42
2.1
42
89
4
133
30
13
20
35
1.91
11446--14009
334
7.8
332
79
8
2559
34
16
14
33
1.90
14059--17530
333
10.6
328
77
8
3027
35
16
14
34
1.89
14097--17529
978
3.5
969
84
6
3749
34
16
14
34
1.89
14031--17530
655
5.4
640
80
9
2781
35
16
14
34
1.89
17603--18849
323
3.8
322
77
10
1249
36
15
14
32
1.89

Tables:   1

The End!