Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007228.1 Corchorus capsularis cultivar CVL-1 contig07249, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14688

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--3201
320
10.1
320
80
7
3009
35
16
14
33
1.89
1493--3199
323
5.3
320
81
4
1853
35
16
14
33
1.89
1493--3644
641
3.3
638
81
6
2191
36
16
14
33
1.89
12660--12684
2
12.5
2
100
0
50
52
0
0
48
1.00
12819--14087
315
4.0
314
78
7
1363
36
15
14
33
1.88

Tables:   1

The End!