Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007229.1 Corchorus capsularis cultivar CVL-1 contig07250, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65597

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
365--401
2
19.0
2
91
5
58
45
0
0
54
1.00
24--724
354
2.0
355
81
7
837
36
14
13
35
1.86
11929--11958
2
15.5
2
93
6
53
0
46
0
53
1.00
12055--12079
1
25.0
1
100
0
50
0
0
0
100
0.00
20853--20881
2
14.5
2
100
0
58
48
0
0
51
1.00
28841--28891
6
8.5
6
82
8
59
17
45
0
37
1.49
29245--29306
28
2.3
28
94
5
110
11
12
22
53
1.71
33550--33701
76
2.0
76
97
0
286
32
21
19
26
1.97
33634--33686
17
3.1
17
79
15
56
37
20
18
22
1.94
34551--34643
28
3.2
31
63
27
85
37
6
8
47
1.60
34532--34646
56
2.1
56
100
0
230
37
7
10
44
1.68
39562--39620
30
1.9
31
89
3
93
30
10
15
44
1.79

Tables:   1

The End!