Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007233.1 Corchorus capsularis cultivar CVL-1 contig07254, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32393

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
681--724
15
2.9
15
82
0
61
0
22
2
75
0.92
1352--1401
15
3.3
15
85
0
73
40
22
24
14
1.90
1343--1399
30
1.9
30
88
0
87
36
22
26
14
1.92
1359--1406
15
3.2
15
87
0
69
33
20
27
18
1.96
15799--15867
34
2.0
34
88
5
104
31
13
7
47
1.69
19827--19861
17
2.0
18
88
5
54
65
0
34
0
0.93
20138--20285
50
2.8
52
75
14
169
39
2
18
40
1.62
20218--20263
18
2.4
19
79
17
51
43
2
19
34
1.63
21006--21589
47
13.7
43
73
17
413
15
26
21
36
1.93
21050--21539
41
11.8
40
75
16
349
15
27
21
35
1.94
21046--21194
35
3.9
35
85
10
163
13
30
22
34
1.92
21121--21281
88
1.8
87
89
4
252
15
28
21
34
1.94
21021--21412
163
2.4
163
93
0
678
16
26
21
35
1.94
27164--27195
6
5.5
6
96
3
57
31
0
12
56
1.37
31556--31648
48
1.9
48
100
0
186
29
19
13
37
1.90

Tables:   1

The End!