Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007238.1 Corchorus capsularis cultivar CVL-1 contig07259, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37250

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
828--871
23
2.0
23
90
4
72
54
6
15
22
1.65
1328--1421
14
6.9
14
67
21
56
52
6
21
20
1.68
1375--1425
14
3.6
14
89
10
77
52
5
21
19
1.66
1417--1571
42
3.7
42
78
13
142
50
3
22
23
1.63
1483--1534
25
2.1
25
82
7
61
55
3
19
21
1.58
21953--22033
40
2.0
41
95
2
146
39
1
7
51
1.38
22206--22255
26
1.9
26
95
0
91
30
10
12
48
1.73
28744--28840
18
5.4
18
81
0
113
8
13
41
37
1.74

Tables:   1

The End!