Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007240.1 Corchorus capsularis cultivar CVL-1 contig07261, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34690

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2702--2774
36
2.1
35
87
7
103
56
2
9
31
1.46
3164--3193
11
2.7
11
94
0
51
53
16
0
30
1.44
3191--3235
13
3.5
13
90
3
74
55
8
13
22
1.65
3191--3243
25
2.1
25
89
6
81
58
9
11
20
1.60
5025--5094
27
2.5
30
75
15
76
18
12
20
48
1.80
5999--6035
12
3.1
12
100
0
74
43
16
24
16
1.87
10352--10388
9
4.0
9
89
3
56
43
0
2
54
1.14
10460--10518
20
3.0
20
78
12
68
54
6
0
38
1.27
15601--15881
69
4.1
69
91
1
429
29
16
26
26
1.97
17381--17440
23
2.7
22
89
7
86
5
16
3
75
1.12
28956--29000
13
3.5
13
90
3
74
55
8
13
22
1.65
28956--29008
25
2.1
25
89
6
81
58
9
11
20
1.60

Tables:   1

The End!