Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007241.1 Corchorus capsularis cultivar CVL-1 contig07262, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29256

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1422--1476
25
2.2
25
96
0
101
41
10
21
25
1.86
1452--1561
55
2.0
55
98
0
211
38
17
20
23
1.93
1825--1853
2
14.5
2
100
0
58
51
0
0
48
1.00
5545--5574
2
15.5
2
93
6
53
46
0
0
53
1.00
5686--5712
9
3.0
9
100
0
54
33
11
11
44
1.75
8411--8446
18
2.1
17
94
5
63
63
8
16
11
1.49
12294--12361
30
2.3
30
87
10
95
20
42
27
8
1.82
14831--14912
37
2.1
40
86
6
116
29
12
6
52
1.62
18623--18656
9
3.9
9
84
7
52
52
14
32
0
1.42
18621--18655
17
2.1
17
100
0
70
54
17
28
0
1.43

Tables:   1

The End!