Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007249.1 Corchorus capsularis cultivar CVL-1 contig07270, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9040

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2598--2633
9
3.8
9
92
7
54
16
0
0
83
0.65
4153--4247
31
3.1
30
82
5
111
34
22
23
20
1.96
4153--4247
30
3.1
30
76
11
104
34
22
23
20
1.96
4188--4818
300
2.1
300
97
0
1183
28
23
21
26
1.99
4942--5546
301
2.0
300
93
1
1036
28
22
21
26
1.99
4214--5726
728
2.1
728
93
0
2571
28
22
21
27
1.99
5455--5890
158
2.8
158
93
1
716
27
21
20
31
1.98
5844--6432
300
2.0
300
89
1
903
30
22
20
26
1.98
5652--6702
569
1.8
570
86
3
1515
29
21
21
28
1.98
6807--7028
111
2.0
111
84
0
291
27
21
24
27
1.99
6249--7591
427
3.1
428
90
1
2036
28
21
21
27
1.99
6918--7344
158
2.7
158
78
7
443
27
21
22
28
1.99
7101--7857
271
2.8
269
87
3
1013
28
21
21
28
1.99
7933--8154
111
2.0
111
80
6
254
27
20
23
28
1.99
6678--8391
699
2.5
696
89
1
2542
28
21
22
27
1.99
8438--8708
110
2.5
111
84
1
330
27
20
22
29
1.98
8601--9025
159
2.7
158
77
4
408
27
21
22
28
1.99

Tables:   1

The End!