Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007255.1 Corchorus capsularis cultivar CVL-1 contig07276, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23827

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23--62
16
2.6
15
88
7
62
32
7
22
37
1.82
829--1009
49
3.7
48
80
5
193
39
7
18
34
1.79
1851--2112
55
4.8
55
94
1
427
48
6
18
26
1.73
2090--2200
34
3.2
33
69
20
91
50
4
15
29
1.63
2056--2271
71
3.0
70
81
6
240
47
6
18
27
1.72
2691--2759
29
2.2
33
77
15
83
62
1
18
17
1.41
2695--2759
31
2.2
31
86
5
89
63
1
18
16
1.40
2611--2847
26
8.9
26
70
16
155
55
3
21
19
1.59
15257--15331
27
2.7
28
85
2
98
18
16
22
42
1.88
15493--15536
21
2.1
21
83
8
54
22
9
13
54
1.67

Tables:   1

The End!