Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007256.1 Corchorus capsularis cultivar CVL-1 contig07277, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24691

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3673--3712
19
2.1
19
90
9
64
22
27
5
45
1.73
13334--13395
30
2.1
30
84
6
81
22
32
14
30
1.94
18032--18641
31
18.5
34
73
17
461
39
9
19
31
1.83
18093--18144
14
3.4
14
73
17
50
38
7
19
34
1.80
18066--18605
94
5.5
95
76
11
406
39
9
18
31
1.83
18061--18641
67
8.9
66
75
15
364
39
9
18
32
1.84
24181--24286
33
3.3
31
85
4
113
8
28
40
22
1.83

Tables:   1

The End!