Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007260.1 Corchorus capsularis cultivar CVL-1 contig07281, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32492

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2600--2662
21
3.0
21
70
23
60
7
52
28
11
1.65
5056--5080
10
2.5
10
100
0
50
48
20
8
24
1.76
5961--5993
6
5.5
6
100
0
66
30
0
15
54
1.41
17343--17399
23
2.5
23
85
0
69
31
17
7
43
1.76
19832--19975
27
5.1
27
70
25
111
20
13
27
38
1.91
19835--19996
26
5.8
25
70
25
96
20
14
27
37
1.92
19835--19995
58
2.8
56
92
3
252
19
14
27
37
1.92
20424--20487
21
3.1
21
82
8
96
31
21
10
35
1.88
20768--20796
2
14.5
2
100
0
58
0
0
51
48
1.00
20835--20908
25
3.0
25
91
0
121
35
18
32
13
1.90
25964--26003
16
2.4
16
84
15
55
42
0
0
57
0.98

Tables:   1

The End!