Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007261.1 Corchorus capsularis cultivar CVL-1 contig07282, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22656

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5610--5657
26
1.9
26
91
8
82
18
12
37
31
1.88
11442--11580
71
2.0
71
85
2
190
42
10
20
25
1.85
11628--12290
42
15.9
42
91
2
1061
37
14
24
23
1.92
12284--12471
37
5.1
36
85
5
261
45
9
17
27
1.79
12284--12473
73
2.6
72
86
5
274
46
9
17
26
1.78
12654--12808
37
4.2
37
87
0
193
40
7
28
24
1.81
12676--12808
37
3.6
37
88
0
194
38
8
30
23
1.84
12813--13003
36
5.2
36
88
5
269
38
10
21
28
1.88
12813--13034
109
2.0
110
81
7
256
41
10
21
26
1.86
16786--16881
35
2.7
35
88
0
147
25
23
15
35
1.94

Tables:   1

The End!