Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007262.1 Corchorus capsularis cultivar CVL-1 contig07283, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11922

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5137--5174
11
3.5
11
89
10
51
39
0
2
57
1.12
5488--5519
2
16.0
2
100
0
64
50
0
0
50
1.00
6876--6958
16
5.3
15
76
17
71
53
27
8
10
1.65
6877--6959
32
2.6
32
81
9
98
53
27
8
10
1.65
6874--6970
16
6.0
16
71
6
52
51
29
8
10
1.65
7153--7224
32
2.2
32
92
0
117
40
30
8
20
1.82
7697--7729
2
17.0
2
93
6
59
51
0
0
48
1.00
7923--7967
16
2.8
16
96
0
81
40
40
13
6
1.71
8669--8711
17
2.5
18
81
11
54
32
44
20
2
1.65
8703--8771
16
4.4
16
90
3
106
40
39
15
4
1.68
8703--8771
31
2.2
31
89
5
104
40
39
15
4
1.68
8866--8900
2
17.5
2
93
0
61
45
0
0
54
0.99
9163--9449
143
2.0
143
99
0
565
32
14
18
34
1.90
10329--10365
13
2.8
13
87
0
56
16
43
8
32
1.77
10364--10440
41
1.9
40
86
2
109
46
12
11
28
1.77

Tables:   1

The End!