Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007266.1 Corchorus capsularis cultivar CVL-1 contig07287, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49541

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2922--2965
15
2.5
19
82
17
60
52
2
0
45
1.13
2914--2969
28
2.0
29
85
3
78
50
3
1
44
1.29
2922--2966
16
2.6
17
79
10
56
53
2
0
44
1.13
13544--13673
65
2.0
65
95
0
233
24
26
24
23
2.00
18452--18562
58
1.9
58
98
0
213
35
5
10
48
1.61
27099--27173
27
2.8
27
83
0
96
17
42
17
22
1.89
33254--33975
360
2.0
359
96
0
1345
34
18
15
30
1.93
42290--42324
17
2.1
16
89
5
52
22
17
5
54
1.64
46294--46332
19
2.1
19
95
0
69
12
17
15
53
1.72
48141--48228
36
2.6
33
80
13
99
25
21
13
39
1.90
48559--48614
28
2.0
29
82
3
69
28
25
17
28
1.98
48725--48793
30
2.5
28
83
9
79
57
17
7
17
1.61
49493--49541
2
24.5
2
100
0
98
48
0
51
0
1.00

Tables:   1

The End!