Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007271.1 Corchorus capsularis cultivar CVL-1 contig07292, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17805

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5213--5257
23
2.0
23
83
8
58
15
11
15
57
1.64
4994--5277
159
1.8
157
88
8
440
22
10
22
44
1.84
5270--5308
19
2.1
19
100
0
78
15
15
25
43
1.86
9628--9658
13
2.4
13
100
0
62
38
12
0
48
1.42
9644--9688
22
2.0
22
100
0
72
42
8
8
40
1.67
9669--9938
133
2.0
133
97
0
504
40
12
11
35
1.80
10084--10124
15
2.8
15
92
3
66
53
0
0
46
1.00
10388--10453
31
2.2
29
84
10
80
36
12
21
30
1.90

Tables:   1

The End!