Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007276.1 Corchorus capsularis cultivar CVL-1 contig07297, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31481

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
603--707
50
2.1
50
90
0
165
42
8
15
33
1.77
755--1005
51
4.9
51
77
12
230
40
7
19
32
1.79
761--995
101
2.3
103
83
6
300
40
8
19
32
1.80
1889--2534
49
13.2
49
86
1
839
23
31
13
31
1.93
3177--3223
21
2.2
21
88
0
67
36
17
23
23
1.95
9773--9837
30
2.1
31
86
8
89
30
18
16
33
1.94
10577--10613
6
6.2
6
100
0
74
48
0
16
35
1.46
10948--10992
23
1.9
23
86
4
63
66
2
28
2
1.15
18080--18173
45
2.2
43
85
11
122
37
23
4
35
1.75
21675--21709
15
2.2
16
90
5
54
40
2
0
57
1.14
24502--24526
2
12.5
2
100
0
50
48
0
0
52
1.00
27467--27743
141
2.0
142
94
0
484
44
9
19
26
1.81
27949--27987
19
2.1
19
100
0
78
23
15
5
56
1.59
29002--29039
11
3.5
11
89
10
51
39
0
2
57
1.12

Tables:   1

The End!