Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007282.1 Corchorus capsularis cultivar CVL-1 contig07303, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35495

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9477--9539
30
2.1
30
91
5
101
20
34
15
28
1.94
9767--9904
31
4.5
31
77
0
132
32
23
23
20
1.98
9773--9907
62
2.2
62
89
0
198
32
22
23
20
1.98
19415--19454
21
1.9
21
89
0
62
12
50
22
15
1.77
20224--20703
49
9.9
49
83
4
587
32
14
30
23
1.94
23655--23739
40
2.1
40
97
0
161
42
15
14
28
1.85
24277--24899
61
9.9
62
74
13
411
33
14
26
25
1.95
24365--24557
33
5.8
33
68
18
105
33
12
28
25
1.93
24531--24891
62
5.7
62
74
13
247
33
16
26
24
1.96
24197--24699
255
2.0
256
83
6
646
33
14
26
25
1.94
24765--24863
37
2.9
33
71
19
85
30
15
27
27
1.96
25285--25320
19
2.0
18
89
10
56
16
30
11
41
1.83
25518--25543
13
2.0
13
100
0
52
53
7
23
15
1.67
30229--30305
33
2.3
32
82
10
93
22
42
25
9
1.82

Tables:   1

The End!