Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007290.1 Corchorus capsularis cultivar CVL-1 contig07311, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18156

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8046--8095
26
1.9
26
84
8
66
52
2
20
26
1.57
8239--8446
37
5.6
36
74
12
170
44
9
17
28
1.80
8265--8376
40
2.9
40
79
11
117
49
9
15
25
1.75
8239--8446
74
2.8
76
81
5
235
44
9
17
28
1.80
8475--9111
39
16.7
38
80
13
588
45
8
22
23
1.79
8473--9142
200
3.5
198
86
8
853
45
8
22
23
1.80
10526--10578
16
3.3
16
81
5
54
50
33
11
3
1.56
10848--10928
29
2.7
29
83
7
92
19
29
16
34
1.94
11737--11779
21
2.0
21
100
0
86
51
9
9
30
1.65
11772--11806
15
2.3
15
100
0
70
37
5
5
51
1.50
11766--11906
58
2.4
58
100
0
282
41
7
12
39
1.71
11830--11864
15
2.3
15
100
0
70
37
5
5
51
1.50
12589--12646
9
6.4
9
85
0
53
32
8
37
20
1.83
15003--15088
29
2.9
29
77
11
102
34
15
27
22
1.94
15454--15490
16
2.3
16
90
0
56
2
13
35
48
1.57

Tables:   1

The End!