Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007292.1 Corchorus capsularis cultivar CVL-1 contig07313, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22904

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3673--3774
43
2.3
43
81
6
125
59
8
15
15
1.59
4863--4897
18
1.9
18
94
0
61
25
17
5
51
1.67
4795--5067
63
4.3
63
85
8
331
20
19
16
42
1.89
4827--5054
127
1.8
126
90
2
368
21
19
17
40
1.92
5364--5422
27
2.2
27
87
0
82
16
13
27
42
1.86
22273--22321
21
2.3
21
82
6
55
42
16
26
14
1.86

Tables:   1

The End!