Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007293.1 Corchorus capsularis cultivar CVL-1 contig07314, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33006

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2101--2161
24
2.7
22
82
9
86
40
3
4
50
1.40
2670--3004
106
3.1
106
93
1
553
38
9
8
43
1.67
7590--7627
20
1.9
20
94
0
67
23
2
26
47
1.65
15984--16028
22
2.0
22
100
0
90
31
13
26
28
1.94
16516--16548
1
33.0
1
100
0
66
100
0
0
0
0.00
16778--16803
2
13.0
2
100
0
52
50
0
0
50
1.00
23648--23857
104
2.0
104
94
0
366
29
14
9
47
1.75
25647--25672
13
2.0
13
100
0
52
15
15
53
15
1.73
26617--26697
42
1.9
42
97
0
153
18
0
25
55
1.43

Tables:   1

The End!