Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007298.1 Corchorus capsularis cultivar CVL-1 contig07319, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7533

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
198--847
22
29.9
22
72
17
216
54
4
20
19
1.62
294--733
7
62.1
7
64
10
56
55
4
20
19
1.59
294--335
15
2.9
15
76
16
52
61
0
16
21
1.34
317--482
36
4.5
36
70
16
115
56
1
22
19
1.52
508--579
20
3.5
20
78
14
85
48
6
20
23
1.74
565--823
94
2.9
93
78
11
227
56
6
20
17
1.62
633--847
116
1.9
114
82
5
265
56
7
19
17
1.64
1714--1761
25
1.9
25
91
0
78
18
20
12
47
1.81
4471--4510
20
2.0
20
95
4
73
50
22
0
27
1.50
4464--4599
72
1.9
73
93
1
238
46
16
8
28
1.76

Tables:   1

The End!