Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007299.1 Corchorus capsularis cultivar CVL-1 contig07320, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5893

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
215--278
32
2.0
32
84
6
85
25
20
12
42
1.87
3017--3057
21
2.0
21
90
0
64
41
0
14
43
1.45
2987--3271
51
5.7
50
74
9
204
41
2
15
40
1.61
3768--3988
35
6.6
35
76
16
195
38
11
17
32
1.85
3768--3892
31
3.9
31
80
4
124
39
12
17
31
1.86
3769--3954
62
2.8
63
80
11
187
38
11
17
32
1.85
4825--5893
331
3.2
330
89
2
1653
34
13
17
35
1.88

Tables:   1

The End!