Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000730.1 Corchorus capsularis cultivar CVL-1 contig00730, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30091

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
599--634
2
18.0
2
94
0
63
47
0
0
52
1.00
900--958
31
1.9
31
92
0
100
25
15
8
50
1.71
2411--2479
11
6.4
11
77
14
63
37
1
1
59
1.15
2426--2483
3
19.7
3
83
16
77
34
1
1
62
1.16
2411--2483
21
3.5
21
76
14
71
36
1
1
60
1.14
2806--2865
26
2.2
26
80
13
68
71
18
6
3
1.22
10968--11009
3
14.0
3
100
0
84
66
0
0
33
0.92
22365--22402
14
2.8
14
88
11
53
42
0
0
57
0.98
22368--22405
17
2.2
18
95
4
69
42
0
0
57
0.98
23572--23597
13
2.0
13
100
0
52
23
30
0
46
1.53
23607--23711
51
2.1
51
98
0
201
38
13
13
35
1.84
27861--27893
16
2.0
17
94
5
59
48
12
0
39
1.40
28389--28423
17
2.1
17
100
0
70
28
0
11
60
1.32
29868--30075
105
2.0
104
97
0
389
41
9
10
38
1.71
30055--30091
2
18.5
2
100
0
74
51
0
0
48
1.00

Tables:   1

The End!