Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007302.1 Corchorus capsularis cultivar CVL-1 contig07323, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23424

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3573--3622
21
2.4
21
86
0
73
58
0
36
6
1.23
6336--6486
75
2.0
75
88
0
221
24
25
16
33
1.96
6477--6825
37
9.5
37
74
7
262
35
22
19
22
1.96
6474--6767
111
2.7
109
80
5
313
34
22
20
22
1.97
6851--6924
36
2.1
36
84
5
96
37
22
14
24
1.92
7190--7456
44
6.1
44
86
1
320
29
23
16
30
1.96
7507--7546
20
2.0
20
95
0
71
37
20
17
25
1.94
8147--8229
27
3.1
27
70
19
84
27
36
16
19
1.93
8407--8450
4
11.0
4
90
0
70
25
4
25
45
1.72
8982--9776
437
1.8
437
82
3
1030
30
12
13
43
1.81
10205--10233
2
14.5
2
100
0
58
51
0
0
48
1.00
17717--17743
13
2.1
13
100
0
54
51
7
7
33
1.58
17941--17990
25
2.0
25
100
0
100
40
4
16
40
1.67
18622--18868
107
2.3
107
86
1
334
41
7
8
41
1.65
20311--20336
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!