Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007307.1 Corchorus capsularis cultivar CVL-1 contig07328, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28541

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2836--2935
52
1.9
52
90
6
159
42
13
13
32
1.82
7369--7408
21
1.9
21
89
0
62
47
5
2
45
1.38
13974--14014
21
2.0
21
85
0
55
29
21
9
39
1.86
15956--16116
53
3.2
53
63
22
148
47
6
16
29
1.73
15952--16140
96
2.0
96
100
0
378
46
6
15
31
1.71
21261--21309
2
23.5
2
91
8
80
46
4
0
48
1.20
22691--22725
2
17.0
2
94
5
61
48
2
0
48
1.16
22801--22829
11
2.7
11
94
5
51
55
13
0
31
1.39
24147--24199
24
2.2
25
89
3
81
35
7
15
41
1.75
24835--24865
16
1.9
16
93
0
53
35
9
0
54
1.33
25452--26192
400
1.9
394
89
2
1160
35
17
12
34
1.88
25452--26192
201
3.7
201
90
2
1115
35
17
12
34
1.88
26248--26296
21
2.3
21
86
6
64
30
10
2
57
1.43
26377--26430
22
2.4
23
78
12
67
31
14
7
46
1.73

Tables:   1

The End!