Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007308.1 Corchorus capsularis cultivar CVL-1 contig07329, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8111

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3101--3142
13
3.2
13
90
6
59
83
0
16
0
0.65
3101--3141
19
2.2
19
86
8
57
82
0
17
0
0.66
4012--4114
51
2.0
50
88
1
152
36
16
11
34
1.85
6452--6682
42
5.5
42
95
0
417
32
9
20
36
1.85
6657--6710
28
1.9
28
84
0
72
29
12
22
35
1.91
6546--6982
154
2.9
148
84
10
512
32
8
18
40
1.81
6673--6756
35
2.4
35
81
0
96
29
9
17
42
1.81
6812--6867
28
2.0
28
89
3
87
30
10
21
37
1.87
6827--6906
35
2.3
35
84
0
97
30
6
16
47
1.71
6529--7037
154
3.3
149
80
10
462
33
8
19
39
1.81
7143--7505
37
9.8
37
75
7
301
43
14
17
25
1.86
7145--7506
74
4.9
74
86
2
505
43
14
17
25
1.86
7903--8111
69
3.0
69
90
1
346
25
30
17
26
1.97

Tables:   1

The End!