Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007309.1 Corchorus capsularis cultivar CVL-1 contig07330, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41329

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3415--3450
19
1.9
18
88
5
54
33
22
2
41
1.68
4429--4462
17
1.9
18
88
5
52
20
11
23
44
1.84
7711--7742
16
2.0
16
100
0
64
18
25
12
43
1.85
10722--10756
15
2.4
14
90
9
52
14
2
0
82
0.77
19085--19277
98
2.0
98
86
4
273
37
13
17
31
1.88
19455--19479
2
12.5
2
100
0
50
0
48
0
52
1.00
31910--31963
28
1.9
28
84
0
72
44
5
3
46
1.44
32447--32565
62
2.0
60
86
8
170
28
7
21
42
1.80
32608--32695
40
2.2
41
85
6
126
34
6
17
42
1.75
32844--34407
37
42.2
36
78
7
1427
45
15
16
22
1.85
32841--34407
74
21.1
74
87
3
1664
45
15
16
22
1.85
36281--36310
15
1.9
16
93
6
53
13
13
3
70
1.30

Tables:   1

The End!