Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007310.1 Corchorus capsularis cultivar CVL-1 contig07331, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49161

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4144--4200
30
1.9
30
85
0
78
33
14
22
29
1.93
6672--6698
2
13.5
2
100
0
54
51
0
0
48
1.00
6992--7025
2
17.0
2
100
0
68
50
0
0
50
1.00
7350--7391
21
2.0
21
86
4
59
26
16
21
35
1.94
8158--8215
31
1.9
29
93
6
98
32
8
3
55
1.47
8703--8757
21
2.8
19
78
10
65
45
23
5
25
1.74
14039--14415
165
2.3
165
92
2
605
44
15
10
28
1.80
15030--15086
9
6.4
9
88
8
82
28
0
0
71
0.86
16462--16489
2
14.0
2
100
0
56
50
0
0
50
1.00
18671--18707
2
18.0
2
94
5
65
48
0
2
48
1.15
22590--22623
12
2.8
12
95
0
59
47
8
29
14
1.75
36247--36647
179
2.3
178
84
1
500
37
16
12
33
1.86

Tables:   1

The End!