Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007315.1 Corchorus capsularis cultivar CVL-1 contig07336, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21388

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6860--6900
13
3.2
13
89
3
57
60
12
9
17
1.57
9030--9097
30
2.3
30
87
10
95
8
27
42
20
1.82
12945--12980
18
2.1
17
94
5
63
11
16
8
63
1.49
15677--15703
9
3.0
9
100
0
54
44
11
11
33
1.75
15815--15844
2
15.5
2
93
6
53
53
0
0
46
1.00
19536--19564
2
14.5
2
100
0
58
48
0
0
51
1.00
19828--19937
55
2.0
55
98
0
211
23
20
17
38
1.93
19913--19967
25
2.2
25
96
0
101
25
21
10
41
1.86

Tables:   1

The End!