Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007324.1 Corchorus capsularis cultivar CVL-1 contig07345, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25997

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1282--1417
70
2.0
67
88
7
202
49
14
12
23
1.78
1485--1543
17
3.5
17
88
4
84
35
18
20
25
1.95
4408--4442
18
1.9
18
88
0
52
17
11
17
54
1.71
7204--7243
20
2.0
20
85
0
53
5
2
20
72
1.15
19882--19945
31
2.1
30
85
5
85
28
12
6
53
1.62
20070--20160
37
2.5
37
85
0
119
15
17
10
56
1.67
21356--21385
7
4.4
7
95
4
53
0
0
10
90
0.47
22938--22981
20
2.1
21
95
4
81
13
11
27
47
1.77
23155--23180
12
2.2
12
100
0
52
23
23
0
53
1.46
25884--25997
48
2.4
48
81
8
142
21
29
14
35
1.92

Tables:   1

The End!