Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007329.1 Corchorus capsularis cultivar CVL-1 contig07350, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25859

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3474--3559
42
2.0
42
90
0
136
22
40
26
10
1.86
3513--3542
12
2.5
12
94
0
51
16
36
33
13
1.88
18773--18823
18
2.8
18
96
0
93
7
13
5
72
1.26
20345--20372
14
2.0
14
100
0
56
78
0
0
21
0.75
21172--21210
2
20.0
2
85
15
55
48
0
2
48
1.15
21172--21210
9
4.4
9
87
6
53
48
0
2
48
1.15
21296--21346
27
1.9
27
84
4
68
41
3
3
50
1.39
21963--22184
92
2.4
92
96
1
410
27
19
15
37
1.92
22178--22217
21
1.9
21
100
0
80
20
22
10
47
1.79

Tables:   1

The End!