Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007340.1 Corchorus capsularis cultivar CVL-1 contig07361, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18054

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1194--1246
22
2.4
22
77
0
61
24
16
9
49
1.76
12141--12220
37
2.2
37
81
4
99
61
12
12
13
1.58
12342--12414
31
2.3
33
80
4
87
50
5
13
30
1.64
13232--13257
2
13.0
2
100
0
52
50
0
0
50
1.00
14763--14802
16
2.6
16
88
4
55
37
17
0
45
1.49
15447--15513
31
2.2
31
86
5
93
47
8
19
23
1.77
15643--15752
31
3.6
31
85
2
143
30
15
11
42
1.83
15821--15861
3
13.7
3
100
0
82
65
0
0
34
0.93
16080--16114
14
2.6
14
90
4
54
37
0
5
57
1.23
16836--16916
31
2.6
31
82
0
108
39
9
14
35
1.80
17527--17560
12
2.7
13
90
4
52
58
8
11
20
1.59

Tables:   1

The End!