Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007344.1 Corchorus capsularis cultivar CVL-1 contig07365, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56741

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7643--7684
12
3.5
12
100
0
84
0
47
33
19
1.49
20370--20409
3
13.3
3
100
0
80
32
0
0
67
0.91
28232--28267
17
2.1
17
90
10
56
69
0
30
0
0.89
34730--34759
6
5.0
6
100
0
60
16
16
0
66
1.25
46117--46141
7
3.6
7
100
0
50
56
16
0
28
1.41
47548--47591
23
1.9
23
85
0
61
40
4
2
52
1.34
48308--48342
2
17.5
2
93
0
61
48
2
0
48
1.16
52220--52313
31
3.3
31
66
22
96
41
8
20
29
1.82
52221--52328
54
2.0
54
100
0
216
40
9
20
29
1.83
53522--53592
34
2.1
34
86
0
97
45
1
25
28
1.62
56403--56502
2
54.5
2
66
23
51
50
2
2
46
1.24
56408--56501
33
2.8
33
73
4
100
50
2
2
45
1.25

Tables:   1

The End!