Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007356.1 Corchorus capsularis cultivar CVL-1 contig07377, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17897

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5663--5728
30
2.2
30
83
5
80
28
10
25
34
1.89
7841--7938
48
2.0
48
96
0
178
32
16
18
32
1.93
8942--9032
16
5.7
16
75
5
85
51
27
13
7
1.67
8943--9032
32
2.8
32
89
0
135
52
27
12
7
1.66
9199--9248
17
3.1
15
77
11
55
38
34
8
20
1.82
10069--10100
2
16.0
2
100
0
64
50
0
0
50
1.00
13370--13432
30
2.1
30
94
5
110
28
17
34
19
1.94

Tables:   1

The End!