Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007363.1 Corchorus capsularis cultivar CVL-1 contig07384, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8053

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
968--1027
22
2.7
23
89
5
81
51
5
21
21
1.66
1024--1223
55
3.6
55
86
1
294
49
7
19
25
1.73
1034--1235
110
1.8
109
92
3
343
48
7
19
25
1.75
1216--1310
32
2.9
31
77
16
93
45
7
24
23
1.78
1670--1889
22
9.8
22
75
12
153
55
7
20
16
1.65
1660--1796
43
3.2
41
79
11
125
56
6
20
16
1.61
1774--1830
15
3.9
15
69
4
53
56
5
22
15
1.60
1877--1923
21
2.2
21
85
7
60
53
10
17
19
1.72
1884--1972
21
4.3
21
78
7
92
51
7
20
20
1.71
2214--2255
21
2.0
21
100
0
84
9
19
38
33
1.84
6679--6703
12
2.1
12
100
0
50
60
8
8
24
1.52

Tables:   1

The End!