Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007366.1 Corchorus capsularis cultivar CVL-1 contig07387, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13876

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
688--815
60
2.1
60
88
0
184
35
17
16
30
1.93
867--1026
60
2.7
60
84
3
198
27
19
16
36
1.93
1177--1249
17
4.4
17
74
6
69
13
10
38
36
1.80
1200--1268
32
2.2
32
94
0
120
17
13
34
34
1.88
1195--1261
32
2.1
32
100
0
134
14
13
37
34
1.86
1426--1503
16
4.9
16
79
0
93
5
12
32
50
1.63
11364--11691
174
1.9
176
84
6
450
33
15
16
34
1.90
12161--12201
2
20.5
2
89
0
64
46
0
4
48
1.23
12260--12446
22
8.5
22
71
15
106
35
14
9
40
1.79
12258--12446
44
4.3
44
74
10
129
34
14
9
40
1.79
12373--12415
21
2.0
21
86
9
59
37
18
6
37
1.78
12398--12469
22
3.5
21
78
9
69
26
16
8
48
1.74
13573--13605
2
16.5
2
100
0
66
51
0
0
48
1.00

Tables:   1

The End!