Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007368.1 Corchorus capsularis cultivar CVL-1 contig07389, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18053

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1122--1355
22
10.7
21
66
20
97
35
14
10
39
1.80
1122--1266
44
3.3
44
88
0
200
36
14
11
37
1.82
1299--1366
22
3.1
21
82
4
82
39
14
10
35
1.80
6690--6726
20
1.9
20
88
5
58
0
24
0
75
0.80
10938--10984
24
2.0
24
100
0
94
42
25
14
17
1.87
11254--11358
31
3.4
31
87
10
160
4
15
40
40
1.68
11254--11358
16
6.8
16
88
9
155
4
15
40
40
1.68
11347--11401
23
2.4
23
84
0
74
3
21
45
29
1.69
14322--14351
16
1.9
15
93
6
51
0
16
56
26
1.40
14341--14385
16
2.8
16
93
0
72
8
13
37
40
1.76
16625--16677
26
2.0
26
85
7
72
33
1
1
62
1.17
17018--17124
22
4.8
21
74
13
90
38
7
15
38
1.76
17113--17168
22
2.5
22
79
0
67
37
16
8
37
1.80
17199--17331
22
5.8
22
73
15
101
39
9
12
38
1.75
17152--17309
71
2.3
69
84
8
196
36
10
14
38
1.80

Tables:   1

The End!