Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007370.1 Corchorus capsularis cultivar CVL-1 contig07391, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7369

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
200--244
21
2.1
22
84
12
58
17
35
8
37
1.81
377--442
33
2.0
33
93
0
114
15
33
33
18
1.92
477--602
42
3.0
42
94
0
216
30
22
10
36
1.87
1039--1079
3
13.7
3
100
0
82
65
0
0
34
0.93
2796--2883
30
3.0
29
83
8
97
20
21
13
44
1.86
5576--5739
26
6.1
26
73
12
134
20
23
2
53
1.58
5678--5734
31
1.9
30
92
7
98
21
26
0
52
1.47
5721--5761
10
4.3
9
82
11
55
19
21
0
58
1.39
5721--5761
19
2.2
19
86
8
57
19
21
0
58
1.39
5576--5839
27
10.1
25
71
23
140
20
23
2
53
1.57
6165--6286
34
3.5
34
73
14
122
29
13
6
50
1.66
6154--6298
71
2.0
71
89
0
218
27
15
6
51
1.67
6242--6628
55
7.6
55
79
16
447
24
17
7
49
1.72
6320--6628
47
6.4
48
80
11
310
24
17
7
50
1.72
6265--6628
150
2.4
143
82
11
421
24
17
7
50
1.72
6375--6628
96
2.7
96
93
2
415
24
17
7
50
1.72

Tables:   1

The End!