Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007373.1 Corchorus capsularis cultivar CVL-1 contig07394, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36513

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3843--3929
33
2.6
34
82
8
99
29
9
19
41
1.82
3920--4025
33
3.3
33
89
6
148
25
10
19
44
1.82
4383--4446
30
2.1
31
88
8
96
31
15
32
20
1.94
7021--7080
29
2.1
29
90
0
93
23
10
20
46
1.80
7105--7244
33
4.3
33
90
4
214
25
10
19
45
1.82
7072--7211
66
2.1
66
85
2
183
27
10
17
44
1.82
7624--7681
30
1.9
30
89
6
91
32
15
27
24
1.95
8340--8877
273
2.0
272
93
1
925
26
14
25
34
1.94
11764--11828
30
2.2
30
88
5
96
23
40
27
9
1.85
21344--21374
15
2.0
16
93
6
55
80
6
6
6
1.02
30084--30117
6
5.7
6
89
0
50
20
41
2
35
1.68
33897--33949
21
2.6
21
85
8
65
30
30
28
11
1.91

Tables:   1

The End!