Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007374.1 Corchorus capsularis cultivar CVL-1 contig07395, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25993

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1628--1667
20
2.0
20
100
0
80
15
40
10
35
1.80
5902--5927
12
2.2
12
100
0
52
61
0
15
23
1.33
11505--11529
12
2.1
12
100
0
50
24
36
8
32
1.84
13979--14137
86
1.8
86
89
4
248
45
6
14
33
1.70
16915--16942
4
7.0
4
100
0
56
25
0
0
75
0.81
18267--18300
13
2.5
14
90
4
52
5
5
61
26
1.42
19152--19180
10
2.9
10
100
0
58
10
0
0
89
0.48
19277--19395
54
2.2
54
84
3
150
30
11
17
40
1.86
19392--19452
28
2.1
29
93
6
106
32
13
24
29
1.93
20492--20526
7
5.1
7
89
3
54
71
0
25
2
1.00

Tables:   1

The End!