Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007376.1 Corchorus capsularis cultivar CVL-1 contig07397, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27491

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34--3907
335
11.7
331
80
6
3882
35
15
15
34
1.89
8872--8919
22
2.3
20
86
10
62
39
25
16
18
1.91
8839--8941
53
1.9
53
90
0
161
35
27
20
16
1.94
8891--8989
31
3.2
31
83
0
117
34
27
20
18
1.95
11477--11577
29
3.4
29
83
6
114
15
29
16
37
1.90
11737--11818
29
2.8
30
79
3
103
35
15
26
21
1.94
13899--14034
68
2.0
68
98
0
263
28
11
27
31
1.92
14059--14087
13
2.2
13
100
0
58
10
0
17
72
1.11
14643--14671
14
2.1
14
100
0
58
13
24
20
41
1.89
14889--14945
29
1.9
29
85
3
78
36
1
17
43
1.60

Tables:   1

The End!