Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007378.1 Corchorus capsularis cultivar CVL-1 contig07399, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26264

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--28
1
28.0
1
100
0
56
100
0
0
0
0.00
868--966
40
2.6
38
92
6
171
27
24
25
23
2.00
14839--14883
21
2.1
21
87
0
63
37
6
35
20
1.79
21139--21178
12
3.3
12
92
0
62
0
40
35
25
1.56
21139--21178
3
13.3
3
83
0
53
0
40
35
25
1.56
24445--24470
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!