Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007379.1 Corchorus capsularis cultivar CVL-1 contig07400, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12361

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1528--1621
48
2.0
48
91
0
152
30
8
8
52
1.62
3267--3398
63
2.1
63
98
0
255
44
9
29
15
1.79
5091--5128
15
2.4
16
91
4
60
18
13
28
39
1.88
7479--7531
21
2.7
19
86
11
79
54
7
37
0
1.29
10772--10822
24
2.2
24
85
3
68
43
9
21
25
1.83
11958--12254
109
2.6
110
91
5
454
49
1
11
37
1.49

Tables:   1

The End!