Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000738.1 Corchorus capsularis cultivar CVL-1 contig00738, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1208

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
128--618
22
22.6
21
69
11
206
36
14
9
39
1.79
263--373
45
2.5
44
81
7
118
39
16
11
32
1.84
433--517
23
3.7
23
84
1
100
37
14
5
42
1.69
394--517
45
2.8
45
80
10
130
37
14
8
39
1.76
205--954
44
17.4
44
67
15
218
36
15
9
39
1.80
746--954
22
9.4
22
75
11
167
33
14
9
43
1.78
763--888
67
1.9
67
83
6
166
30
14
9
46
1.76
723--931
111
1.9
108
82
7
260
32
13
10
44
1.77

Tables:   1

The End!