Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007380.1 Corchorus capsularis cultivar CVL-1 contig07401, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22320

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2943--2972
13
2.2
14
94
5
53
6
16
0
76
0.99
7429--7455
2
13.5
2
100
0
54
48
0
0
51
1.00
15182--15215
12
2.7
13
90
4
52
20
11
8
58
1.59
15212--15238
6
4.5
6
100
0
54
29
0
14
55
1.40
17760--17796
14
2.7
14
95
4
67
40
8
5
45
1.56
18114--18141
6
4.7
6
100
0
56
71
14
0
14
1.15
18107--18141
18
1.9
18
88
0
52
74
14
0
11
1.08
18461--18502
17
2.5
17
92
7
68
88
0
0
11
0.53
18472--18521
17
3.0
17
85
5
66
80
0
8
12
0.92
18461--18518
8
7.0
8
84
7
62
82
0
5
12
0.82
19473--19634
24
6.3
24
69
16
101
27
22
3
46
1.66
19532--20199
8
88.2
8
64
19
133
27
20
5
46
1.73
19533--19643
37
2.9
37
80
6
98
26
22
2
48
1.64
19612--19651
21
1.9
21
84
0
53
27
17
0
55
1.43
19773--19810
14
2.7
14
91
0
58
26
23
2
47
1.65
19785--20199
22
18.2
22
67
20
107
29
19
5
46
1.72
19805--19913
14
8.0
14
68
25
65
29
19
4
46
1.69
19791--19906
30
4.0
29
85
8
132
29
18
4
47
1.68
19786--20129
30
11.4
29
68
18
111
29
19
5
46
1.71
20107--20138
15
2.1
15
94
0
55
31
18
3
46
1.65
20045--20197
75
2.0
77
86
5
213
30
18
5
45
1.73
20699--20725
2
13.5
2
100
0
54
48
0
0
51
1.00

Tables:   1

The End!