Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007381.1 Corchorus capsularis cultivar CVL-1 contig07402, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6723

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
661--711
15
3.6
15
74
15
63
33
3
0
62
1.13
835--1026
22
8.6
22
69
16
101
42
9
14
33
1.79
852--947
21
4.4
22
75
12
72
43
9
13
33
1.76
1164--1415
22
11.8
22
69
12
116
41
9
14
34
1.78
1164--1308
66
2.2
63
81
7
157
44
8
15
31
1.77
1380--1426
22
2.1
22
92
0
76
34
10
14
40
1.81
1380--1435
22
2.5
23
83
13
73
35
12
12
39
1.81
1511--1661
22
6.9
22
67
13
78
40
10
13
35
1.80
5118--5249
51
2.6
51
92
0
219
27
16
28
28
1.97
5744--5776
6
5.5
6
96
0
57
57
15
0
27
1.38

Tables:   1

The End!