Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007382.1 Corchorus capsularis cultivar CVL-1 contig07403, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34979

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1692--1761
30
2.3
31
85
2
88
28
17
21
32
1.96
3053--3111
25
2.5
22
84
15
75
23
3
3
69
1.19
3053--3103
25
2.1
24
89
10
77
25
3
3
66
1.26
4987--5017
16
1.9
16
93
0
53
29
0
25
45
1.54
15309--15371
32
2.0
31
87
9
92
38
4
12
44
1.64
19584--19621
2
19.0
2
94
0
67
2
47
0
50
1.15
33429--33466
11
3.5
11
85
10
51
57
2
0
39
1.12
33780--33837
27
2.1
27
81
6
64
34
12
3
50
1.57

Tables:   1

The End!