Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007385.1 Corchorus capsularis cultivar CVL-1 contig07406, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8884

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6032--6078
13
3.1
16
79
20
64
31
8
6
53
1.57
6048--6144
13
6.8
13
72
23
79
39
9
8
43
1.67
6022--6166
61
2.3
60
83
14
179
37
9
13
40
1.77
7906--7952
24
2.0
24
86
0
67
29
25
2
42
1.67
7930--8061
58
2.3
58
85
2
167
21
23
12
43
1.86
8056--8177
22
5.6
22
79
9
72
29
20
3
46
1.66
8134--8506
30
12.9
30
69
20
147
31
21
4
43
1.72
8140--8828
14
48.1
14
66
20
148
29
21
5
43
1.74
8140--8567
44
9.9
43
68
18
153
30
21
4
43
1.72
8127--8258
22
6.0
22
68
21
62
27
22
5
44
1.74
8142--8314
58
3.0
58
80
5
181
28
21
5
44
1.74
8246--8672
22
19.2
22
69
17
151
29
21
4
43
1.73
8224--8354
36
3.6
38
75
12
112
33
19
3
43
1.67
8256--8447
83
2.4
82
79
8
205
32
20
5
42
1.74
8416--8493
36
2.2
36
86
4
104
33
20
2
43
1.65
8500--8567
30
2.3
29
82
10
75
30
23
1
44
1.63
8074--8575
8
68.4
7
67
22
75
30
21
4
43
1.72
8421--8726
44
7.1
42
68
16
146
28
21
5
44
1.74
8699--8828
44
3.0
43
82
4
145
29
22
5
43
1.75
8773--8828
22
2.5
22
79
0
58
30
21
3
44
1.69

Tables:   1

The End!