Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007392.1 Corchorus capsularis cultivar CVL-1 contig07413, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17802

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--88
33
2.7
34
92
7
155
14
34
35
15
1.89
5539--5568
14
2.1
14
93
0
51
26
0
36
36
1.57
7558--7587
14
2.1
15
93
6
53
0
10
0
90
0.47
9002--9353
156
2.3
156
78
10
343
31
16
18
33
1.93
9713--9745
17
1.9
17
100
0
66
30
36
6
27
1.81
9893--9932
21
1.9
21
94
0
71
30
32
17
20
1.95
10405--10440
18
2.0
18
100
0
72
38
16
11
33
1.84

Tables:   1

The End!